2016年
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DNA-assisted multichromophore assembly in Modified nucleic acids
Takada, T.; Nakamura, M.; Yamana, K.
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Helically assembled pyrene arrays on an RNA duplex that exhibit circularly polarized luminescence with excimer formation
Nakamura, M.; Suzuki, J.; Ota, F.; Takada, T.; Akagi, K.; Yamana, K.
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Blockade and staircase phenomena of holes in mesoscopic scale λ-deoxyribonucleic acid/sio2/si structure
Matsuo, N.; Takada, T.; Heya, A.; Yamana, K.; Sato, T.; Yokoyama, S.; Omura, Y.
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2015年
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Photoresponsive DNA monolayer prepared by primer extension reaction on the electrode
Takada, T.; Takemura, M.; Kawano, Y.; Nakamura, M.; Yamana, K.
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Photocurrent generation through charge-transfer processes in noncovalent perylenediimide/DNA complexes.
Takada, T.; Ido, M.; Ashida, A.; Nakamura, M.; Fujitsuka, M.; Kawai, K.; Majima, T.; Yamana, K.
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Donor-acceptor heterojunction configurations based on DNA-multichromophore arrays
Nakamura, M.; Tsuto, K.; Jomura, A.; Takada, T.; Yamana, K.
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Highly ordered pyrene π‐stacks on an RNA duplex
Nakamura, M.; Takada, T.; Yamana, K.
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2014年
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DNAナノワイヤーを用いる電子デバイス
山名一成
化学, 69 (11), 66-67 (2014).
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DNA構造を利用して組織化された機能性色素の光化学的挙動
高田忠雄・山名一成
光化学協会誌, 45 (1), 17-20 (2014).
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Diketopyrrolopyrrole j-aggregates formed by self-organization with DNA.
Tsuto, K.; Nakamura, M.; Takada, T.; Yamana, K.
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Light-up fluorescent probes utilizing binding behavior of perylenediimide derivatives to a hydrophobic pocket within DNA
Takada, T.; Yamaguchi, K.; Tsukamoto, S.; Nakamura, M.; Yamana, K.
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Preparation of ferrocene-functionalized gold nanoparticles by primer extension reaction on the particle surface
Takada, T.; Tochi, T.; Nakamura, M.; Yamana, K.
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Formation of a charge transfer complex within a hydrophobic cavity in DNA
Takada, T.; Otsuka, Y.; Nakamura, M.; Yamana, K.
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Photocurrent generation enhanced by charge delocalization over stacked perylenediimide chromophores assembled within DNA
Takada, T.; Ashida, A.; Nakamura, M.; Fujitsuka, M.; Majima, T.; Yamana, K.
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DNA length dependent photocurrent of diketopyrrolopyrrole aggregates constructed with DNA
Nakamura, M.; Tsuto, K.; Takada, T.; Yamana, K.
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Preparation of fluorescent nucleic acids generating unique emission by primer extension reaction using pyrene-labeled deoxyuridine triphosphate derivatives
Takada, T.; Tanimizu, Y.; Nakamura, M.; Yamana, K.
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Study of charge retention mechanism for DNA memory FET
Maeno, S.; Matsuo, N.; Nakamura, S.; Heya, A.; Takada, T.; Yamana, K.; Fukuyama, M.; Yokoyama, S.
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2013年
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Synthesis and charge transferability of DNA possessing a naphthalimide photosensitizer at an extrahelical position
Takada, T.; Kawano, Y.; Ashida, A.; Nakamura, M.; Kawai, K.; Majima, T.; Yamana, K.
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Cationic perylenediimide as a specific fluorescent binder to mismatch containing DNA
Takada, T.; Ashida, A.; Nakamura, M.; Yamana, K.
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2012年
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Gating electrical transport through DNA molecules that bridge between silicon nanogaps
Takagi, S.; Takada, T.; Matsuo, N.; Yokoyama, S.; Nakamura, M.; Yamana, K.
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Molecular arrangement and assembly guided by hydrophobic cavities inside DNA
Takada, T.; Otsuka, Y.; Nakamura, M.; Yamana, K.
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Photo-triggered generation of a free thiol group on DNA: Application to DNA conjugation
Takada, T.; Kawano, Y.; Nakamura, M.; Yamana, K.
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DNA-templated assembly of naphthalenediimide arrays
Nakamura, M.; Okaue, T.; Takada, T.; Yamana, K.
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Highly ordered pyrene π-stacks on an rna duplex display static excimer fluorescence
Nakamura, M.; Fukuda, M.; Takada, T.; Yamana, K.
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Electrical property of DNA field-effect transistor: Charge retention property
Matsuo, N.; Takagi, S.; Yamana, K.; Heya, A.; Takada, T.; Yokoyama, S.
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2011年
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Electron transfer through rna: Chemical probing of dual distance dependence
Takada, T.; Otsuka, Y.; Nakamura, M.; Yamana, K.
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2010年
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Fluorescent analysis of excess electron transfer through DNA
Takada, T.; Tanaka, C.; Nakamura, M.; Yamana, K.
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Electronic aptamer-based biosensor for multiprotein analytes on a single paltform
Hayashi, E.; Takada, T.; Nakamura, M.; Yamana, K.
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Syntheses and fluorescence of rna conjugates having pyrene-modified adenosine and nitrobenzene-modified uridine base pairs
Fukuda, M.; Nakamura, M.; Takada, T.; Yamana, K.
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2009年
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Electronic detection of DNA mutation based on strand exchange reaction
Watanabe, M.; Kumamoto, S.; Nakamaura, M.; Yamana, K.
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Synthesis and characterization of deoxyuridine triphosphates labeled with pyrene
Tanimizu, Y.; Takada, T.; Nakamura, M.; Yamana, K.
Nucleic acids symposium series 131-132 (2009).
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Fluorescence quenching properties of multiple pyrene-modified rnas
Maie, K.; Nakamura, M.; Takada, T.; Yamana, K.
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Rna-mediated electron transfer: Double exponential distance dependence
Maie, K.; Miyagi, K.; Takada, T.; Nakamura, M.; Yamana, K.
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DNA ligation using photoremovable protecting groups
Kawano, Y.; Takada, T.; Nakamura, M.; Yamana, K.
Nucleic acids symposium series 173-174 (2009).
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Synthesis and hybridization of oligonucleotides attached to a redox reporter via ethenyl linker at 5-position of pyrimidine base
Hasegawa, Y.; Nakamura, M.; Takada, T.; Yamana, K.
Nucleic acids symposium series 145-146 (2009).
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Duplex formation of multiple pyrene-modified rnas
Fukuda, M.; Nakamura, M.; Takada, T.; Yamana, K.
Nucleic acids symposium series 133-134 (2009).
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Target-induced strand release (tisr) from aptamer-DNA duplex: A general strategy for electronic detection of biomolecules ranging from a small molecule to a large protein
Yoshizumi, J.; Kumamoto, S.; Nakamura, M.; Yamana, K.
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Bis-pyrene-labeled molecular beacon: A monomer-excimer switching probe for the detection of DNA base alteration
Yamana, K.; Ohshita, Y.; Fukunaga, Y.; Nakamura, M.; Maruyama, A.
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Zipper-like assembly of multi-pyrenes covalently attached to rna sequences via duplex formation
Nakamura, M.; Murakami, Y.; Yamana, K.
Nucleic acids symposium series 707-708 (2008).
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Pyrene-zipper array assembled via rna duplex formation
Nakamura, M.; Murakami, Y.; Sasa, K.; Hayashi, H.; Yamana, K.
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Efficient quenching of the excimer fluorescence derived from pyrene arrays on rna duplexes
Maie, K.; Nakamura, M.; Yamana, K.
Nucleic acids symposium series 705-706 (2008).
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2′-anthraquinone-conjugated oligonucleotide as an electrochemical probe for DNA mismatch
Kumamoto, S.; Watanabe, M.; Kawakami, N.; Nakamura, M.; Yamana, K.
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Electrochemical biosensors based on DNA strand exchange
Watanabe, M.; Yoshizumi, J.; Kumamoto, S.; Nakamura, M.; Maruyama, A.; Yamana, K.
Nucleic acids symposium series 321-322 (2007).
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Structure and excimer fluorescence of helical-pyrene-arrays assembled on duplex rna
Nakamura, M.; Yamana, K.; Simomura, Y.; Ohtoshi, Y.
Nucleic acids symposium series 275-276 (2007).
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Electrochemical properties of anthraquinone-capped DNA-hairpins immobilized on gold surface
Nakamura, M.; Ueda, M.; Watanabe, S.; Kumamoto, S.; Yamana, K.
Nucleic acids symposium series 317-318 (2007).
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Syntheses of anthraquinone capped hairpin dnas and electrochemical redox responses from their self-assembled monolayers on gold electrode
Nakamura, M.; Ueda, M.; Watanabe, S.; Kumamoto, S.; Yamana, K.
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Pyrene aromatic arrays on rna duplexes as helical templates
Nakamura, M.; Shimomura, Y.; Ohtoshi, Y.; Sasa, K.; Hayashi, H.; Nakano, H.; Yamana, K.
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Highly emissive pyrene-excimer formation in self-assembled monolayer on gold surface and photocurrent generation from the excimer
Nakamura, M.; Saito, N.; Takayama, K.; Kumamoto, S.; Yamana, K.
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Photocurrent responses from pyrene-modified rna duplexes on gold surface
Maie, K.; Nakamura, M.; Yamana, K.
Nucleic acids symposium series 319-320 (2007).
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Photoelectrochemical properties of pyrene modified DNA immobilized on gold electrode
Saito, N.; Takayama, K.; Nakamura, M.; Yamana, K.
Nucleic acids symposium series 311-312 (2006).
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Conformational changes of DNA by photoirradiation of DNA-bis(zn ii-cyclen)-azobenzene complex
Maie, K.; Nakamura, M.; Yamana, K.
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Electrochemical detection of DNA single base mismatch by the use of strand exchange reaction
Kumamoto, S.; Maruyama, A.; Nakamura, M.; Yamana, K.
Nucleic acids symposium series 93-94 (2006).
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Pyrene-modified DNA aptamer as a fluorescent biosensor with high affinity and specificity for atp sensing
Kamekawa, N.; Shimomura, Y.; Nakamura, M.; Yamana, K.
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DNA mismatch detection using a pyrene-excimer-forming probe
Yamana, K.; Fukunaga, Y.; Ohtani, Y.; Sato, S.; Nakamura, M.; Kim, W. J.; Akaike, T.; Maruyama, A.
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Electrochemical detection of single base mismatches in DNA using redox-modified oligonucleotides
Orino, N.; Kumamoto, S.; Nakamura, M.; Yamana, K.
Nucleic acids symposium series 139-140 (2005).
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Alignment of pyrene aromatics along rna double helix
Ohtoshi, Y.; Nakamura, M.; Yamana, K.
Nucleic acids symposium series 141-142 (2005).
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New pyrene-excimer probe for detection of single base mismatches in DNA
Ohshita, Y.; Nakamura, M.; Maruyama, A.; Yamana, K.
Nucleic acids symposium series 137-138 (2005).
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Helical pyrene-array along the outside of duplex rna
Nakamura, M.; Ohtoshi, Y.; Yamana, K.
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Crystal structure of 8-hydroxyquinoline-2-carboxylic acid copper(ii) complex
Nakamura, M.; Kitamura, C.; Ueyama, H.; Yamana, K.; Yoneda, A.
Analytical Sciences: X-ray Structure Analysis Online 21, x115-x116 (2005).
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Pyrene is highly emissive when attached to the rna duplex but not to the DNA duplex: The structural basis of this difference
Nakamura, M.; Fukunaga, Y.; Sasa, K.; Ohtoshi, Y.; Kanaori, K.; Hayashi, H.; Nakano, H.; Yamana, K.
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Electrochemistry of redox-modified oligonucleotides bound to gold surface
Kawakami, N.; Fujishima, T.; Nakamura, M.; Yamana, K.
Nucleic acids symposium series 247-248 (2004).
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Bis-pyrene labeled DNA aptamer as an intelligent fluorescent biosensor
Yamana, K.; Ohtani, Y.; Nakano, H.; Saito, I.
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Electrochemical detection of single-base mismatches in DNA by a redox-active intercalator conjugated oligonucleotide
Yamana, K.; Kawakami, N.; Ohtsuka, T.; Sugie, Y.; Nakano, H.; Saito, I.
Nucleic acids research. Supplement (2001) 89-90 (2003).
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Detection of acceptor sites for antisense oligonucleotides on native folded rna by fluorescence spectroscopy
Mahara, A.; Iwase, R.; Sakamoto, T.; Yamaoka, T.; Yamana, K.; Murakami, A.
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Electrochemistry of 2′-anthraquinone-modified oligonucleotide immobilized on gold surface: Differential electron transfer efficiency between single and double helical forms
Yamana, K.; Kumamoto, S.; Hasegawa, T.; Nakano, H.; Sugie, Y.
Chem. Lett. 506-507 (2002).
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Bis-pyrene-labeled oligonucleotides: Sequence specificity of excimer and monomer fluorescence changes upon hybridization with DNA
Yamana, K.; Iwai, T.; Ohtani, Y.; Sato, S.; Nakamura, M.; Nakano, H.
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Molecular sensing by pyrene excimer signal of fluorescent DNA aptamer
Ohtani, Y.; Yamana, K.; Nakano, H.
Nucleic Acids Res Suppl 169-170 (2002).
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Bispyrene-conjugated 2′-o-methyloligonucleotide as a highly specific rna-recognition probe
Mahara, A.; Iwase, R.; Sakamoto, T.; Yamana, K.; Yamaoka, T.; Murakami, A.
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Hybridization-dependent electrochemical responses of anthraquinone-modified oligonucleotides
Kumamoto, S.; Nakano, H.; Matsuo, Y.; Sugie, Y.; Yamana, K.
Electrochemistry 70, 789-794 (2002).
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Probing DNA sequences by anthraquinone-modified DNA that is immobilized on gold surface
Kumamoto, S.; Kawakami, N.; Fujishima, T.; Ohtsuka, T.; Yamana, K.; Nakano, H.; Sugie, Y.
Nucleic Acids Res Suppl 39-40 (2002).
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Fluorescence detection of specific rna sequences using 2′-pyrene-modified oligoribonucleotides
Yamana, K.; Zako, H.; Asazuma, K.; Iwase, R.; Nakano, H.; Murakami, A.
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Electrochemistry of DNA duplex containing an anthraquinonylmethyl group at the 2'-sugar position
Yamana, K.; Kumamoto, S.; Nakano, H.; Sugie, Y.
Nucleic Acids Res Suppl 35-36 (2001).
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Cyclic voltammetric responses in hybrid formation of 2'-anthraquinone-modified oligonucleotide with DNA
Yamana, K.; Kumamoto, S.; Nakano, H.; Matsuo, Y.; Sugie, Y.
Chem. Lett. 1132-1133 (2001).
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Synthesis of oligonucleotide derivatives containing a bis-pyrene residue in the main chain
Yamana, K.; Iwai, T.; Nakano, H.
Nucleic acids symposium series 27-28 (2000).
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Coumarin-fluorescein pair as a new donor-acceptor set for fluorescence energy transfer study of DNA
Mitsui, T.; Nakano, H.; Yamana, K.
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Synthesis and properties of oligonucleotide duplexes containing donor and acceptor fluorophores at 2'-positions
Yamana, K.; Mitsui, T.; Nakano, H.
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Oligonucleotides labeled by fluorophores at the sugar 2'-positions for fluorescence energy transfer study of nucleic acid structure
Yamana, K.; Mitsui, T.
Nucleosides and Nucleotides 18, 1565-1566 (1999).
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Synthesis of oligonucleotides containing a new azobenzene fragment with efficient photoisomerizability
Yamana, K.; Kan, K.; Nakano, H.
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5'-pyrene modified oligonucleotide provides a highly sensitive fluorescent probe of rna
Yamana, K.; Iwase, R.; Furutani, S.; Tsuchida, H.; Zako, H.; Yamaoka, T.; Murakami, A.
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Synthesis and properties of oligonucleotides containing 2'-pyrenylalkyluridine
Yamana, K.; Asazuma, K.; Nakano, H.
Nucleic acids symposium series 113-114 (1999).
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Synthesis and binding properties of oligonucleotides containing an azobenzene linker
Yamana, K.; Yoshikawa, A.; Noda, R.; Nakano, H.
Nucleosides and Nucleotides 17, 233-242 (1998).
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Synthesis of oligonucleotide derivatives containing pyrene labeled glycerol linkers : Enhanced excimer fluorescence on binding to a complementary DNA sequence
Yamana, K.; Takei, M.; Nakano, H.
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Synthesis, binding and fluorescence properties of oligonucleotide derivatives having a dansyl fluorescence label attached to the 2'-position of a ribonucleoside
Yamana, K.; Ohashi, Y.; Nunota, K.; Nakano, H.
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An uridine derivative containing a hydrophobic fluorescent probe at the 2'-position: Synthesis and its incorporation into oligonucleotides
Yamana, K.; Mitsui, T.; Hayashi, H.; Nakano, H.
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Homopyrimidine oligonucleotides modified by a pyrenylmethyl group at the terminal position: Enhanced fluorescence upon binding to double helical DNA
Yamana, K.; Kumamoto, S.; Nakano, H.
Chem. Lett. 1173-1174 (1997).
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Synthesis and properties of oligonucleotide derivatives containing a hydrophobic fluorescent dye at the 2'-position
Mitsui, T.; Hayashi, H.; Yamana, K.; Nakano, H.
Nucleic acids symposium series 69-70 (1997).
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Synthesis of a new photoisomerizable linker for connecting two oligonucleotide segments
Yamana, K.; Yoshikawa, A.; Nakano, H.
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Incorporation of two anthraquinonylmethyl groups into the 2'-o-positions of oligonucleotides: Increased affinity and sequence specificity of anthraquinone-modified oligonucleotides in hybrid formation with DNA and rna
Yamana, K.; Mitsui, T.; Yoshioka, J.; Isuno, T.; Nakano, H.
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Synthesis of oligonucleotide derivatives containing an azobenzene linker
Yamana, K.; Yoshikawa, A.; Shimura, A.; Nakano, H.
Nucleic acids symposium series 39-40 (1995).
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Oligonucleotides having covalently linked anthracene at specific sugar residue: Differential binding to DNA and rna and fluorescence properties
Yamana, K.; Aota, R.; Nakano, H.
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Synthesis and properties of oligonucleotides with modified sugar fragment
Yamana, K.
Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 40, 1349-1356 (1995).
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Interaction of oligonucleotides containing anthraquinone at the 2'-sugar position with complementary nucleic acids
Mitsui, T.; Yoshioka, J.; Isuno, T.; Yamana, K.; Nakano, H.
Nucleic acids symposium series 35-36 (1995).
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A new method for introduction of a pyrene group into a terminal position of an oligonucleotide
Yamana, K.; Nunota, K.; Nakano, H.; Sangen, O.
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Effect of crystallizability of hard segments in polyether-polyester block copolymers on the segregation of a soft segment to polymer surface
Yamasaki, H.; Yoshida, K.; Yamana, K.; Nakado, H.; Fukae, R.; Sangen, O.
Kobunshi Ronbunshu 50, 935-940 (1993).
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Sequence specific block of in vitro DNA synthesis with isopropyl phosphotriesters in template oligodeoxyribonucleotides
Yashiki, T.; Yamana, K.; Nunota, K.; Negishi, K.
Nucleic acids symposium series 197-198 (1992).
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Fluorescent-labeled oligonucleotides that exhibit a measurable signal in the presence of complementary DNA
Yamana, K.; Ohashi, Y.; Nunota, K.; Aoki, M.; Nakano, H.; Sangen, O.
Nucleic acids symposium series 135-136 (1992).
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Enhanced fluorescence in the binding of oligonucleotides with a pyrene group in the sugar fragment to complementary polynucleotides
Yamana, K.; Gokota, T.; Ozaki, H.; Nakano, H.; Sangen, O.; Shimidzu, T.
Nucleosides and Nucleotides 11, 383-390 (1992).
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Micro phase-separated structure of polyether-polyester block copolymers and wettabilities of the polymer surfaces
Sangen, O.; Kumeno, M.; Yamasaki, H.; Nakano, H.; Yamana, K.
Kobunshi Ronbunshu 49, 459-466 (1992).
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Inhibition of DNA chain elongation by a phosphotriester linkage in template oligodeoxyribonucleotides
Yashiki, T.; Yamana, K.; Nishijima, Y.; Negishi, K.
Nucleic acids symposium series 25-26 (1991).
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Synthesis of oligonucleotide derivatives with pyrene group at sugar fragment
Yamana, K.; Ohashi, Y.; Nunota, K.; Kitamura, M.; Nakano, H.; Sangen, O.; Shimidzu, T.
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Deoxyribonucleoside 3'-phosphorobisamidites in the synthesis of isopropyl phosphotriester oligodeoxyribonucleotide analogues
Yamana, K.; Nishijima, Y.; Negishi, K.; Yashiki, T.; Nishio, K. I.; Nakano, H.; Sangen, O.
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Synthesis of oligonucleotide derivatives with dansyl group at sugar fragment
Ohashi, Y.; Yamana, K.; Nakano, H.; Sangen, O.
Nucleic acids symposium series 15-16 (1991).
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Synthesis and interactive properties of an oligonucleotide with anthraquinone at the sugar fragment
Yamana, K.; Nishijima, Y.; Ikeda, T.; Gokota, T.; Ozaki, H.; Nakano, H.; Sangen, O.; Shimidzu, T.
Bioconjugate Chem. 1, 319-324 (1990).
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Oligonucleotides with pyrene fluorophore at the sugar fragment: Synthesis and properties in binding to complementary polynucleotide
Yamana, K.; Gokota, T.; Ohashi, Y.; Ozaki, H.; Kitamura, M.; Nakano, H.; Sangen, O.; Shimidzu, T.
Nucleic acids symposium series 103-104 (1990).
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A simple preparation of 5′-o-dimethoxytrityl deoxyribonucleoside 3′-o-phosphorbisdiethylamidites as useful intermediates in the synthesis of oligodeoxyribonucleotides and their phosphorodiethylamidate analogs on a solid support
Yamana, K.; Nishijima, Y.; Oka, A.; Nakano, H.; Sangen, O.; Ozaki, H.; Shimidzu, T.
Tetrahedron 45, 4135-4140 (1989).
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A phosphorbisamidite approach to the synthesis of oligodeoxyribonucleotides and their analogues
Yamana, K.; Nishijima, Y.; Nakano, H.; Sangen, O.; Ozaki, H.; Shimidzu, T.
Nucleic acids symposium series 31-32 (1989).
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Synthesis, isolation and characterization of diastereochemically pure dithymidine phosphormorpholidate derivatives
Ozaki, H.; Yamana, K.; Shimidzu, T.
Tetrahedron Lett. 30, 5899-5902 (1989).
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Aminophosphordichloridite: A new phosphorylating reagent for one-pot synthesis of 3'-5'- or 2'-5'-linked diribonucleotide having defined sequence
Shimidzu, T.; Yamana, K.; Maikuma, S.
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Synthesis of 5-bromouridine oligonucleotides by the reaction of 5-bromouridine with tri(imidazol-1-yl)phosphin
Shimidzu, T.; Yamana, K.
Polymer Journal 15, 727-732 (1983).
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Synthesis and properties of cationic polynucleotide analog binding rnase a
Shimidzu, T.; Murakami, A.; Yamana, K.
Bull. Chem. Soc. Jpn. 56, 3657-3660 (1983).
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Uridine oligonucleotide synthesis by the reaction of uridine with tri-(imidazol-1-yl)phosphine
Shimidzu, T.; Yamana, K.; Nakamichi, K.; Murakami, A.
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Synthesis of uridine oligonucleotide by the reaction of unprotected uridine with tri-(imidazolyl-(1)) phosphine
Shimizdu, T.; Yamana, K.; Murakami, A.; Nakamichi, K.
Nucleic acids symposium series s81-84 (1980).
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Synthesis of uridine oligonucleotide by the reaction of unprotected uridine with tri-(imidazolyl-(1))phosphine
Shimidzu, T.; Yamana, K.; Murakami, A.; Nakamich, K.
Tetrahedron Lett. 21, 2717-2720 (1980).
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